RE: Saving hdf5 ADPilatus images along with ROI and stats data from the same frame

["Ivashkevych, Oksana via Tech-talk" <tech-talk at aps.anl.gov>]

Hi Mark,

 

They are interested in total counts and max_count from their 4 ROIs. ROI_Start, and ROI_SIZE I can take from “EPICS_PV”.

I understand same things can be archived with ROIStats, which would be fine too.

 

Thank you

Oksana  

 

 

> -----Original Message-----

> From: Mark Rivers <rivers at cars.uchicago.edu>

> Sent: Tuesday, February 23, 2021 11:21 AM

> To: Ivashkevych, Oksana <oksana at bnl.gov>

> Cc: tech-talk at aps.anl.gov

> Subject: Re: Saving hdf5 ADPilatus images along with ROI and stats data from

> the same frame

>

> Hi Oksana,

>

>

> type=PARAM can only be used for parameters generated by that plugin or

> driver, not by other plugins.

>

>

> However, you may be able to do what you want by changing your plugin

> chain.

>

>

> - Can you please diagram you plugin chain?

>

> - Are you using both the NDPluginStats and NDPluginROIStats plugin?  If so, is

> this necessary?

>

> - Is the HDF5 file saving the entire image, or just a specific ROI?

>

> Mark

>

>

> ________________________________

> From: Tech-talk <tech-talk-bounces at aps.anl.gov> on behalf of Ivashkevych,

> Oksana via Tech-talk <tech-talk at aps.anl.gov>

> Sent: Tuesday, February 23, 2021 10:05 AM

> To: Tech-talk

> Subject: Saving hdf5 ADPilatus images along with ROI and stats data from the

> same frame

>

>

> Hello,

>

> I am trying to configure hdf5 plugin to save N images with 4 ROI data (start,

> size), and 4 Stats, connected to ROIs ( total , maxValue).

>

>

>

> I have created Attributes.xml file  following example from ADSimDetector.

> type="EPICS_PV" works, however type="PARAM" does not for parameters

> from areaDetector/ADCore/ADApp/pluginSrc/, but does work for params

> from areaDetector/ADCore/ADApp/ADSrc/.

>

>

>

> It looks like with "EPICS_PV" type statistics data come from the previous

> frame.

>

>

>

> I was wondering if there is something I am missing, or there are other ways

> to get the correct statistics into the hdf5 file. I have tried using Stats,

> ROIStats, and ROI plugins.

>

> The green attributes are correctly saved, others show NaN in hdf5 file.

>

>

>

> I have ADCore 3.6.0; ADPilatus 2.6.0

>

> Thank you

>

>

>

> Attributes.xml:

>

>

>

> <?xml version="1.0" standalone="no" ?>

>

> <!-- Attributes -->

>

> <Attributes

>

>     xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"

>

>

> xsi:noNamespaceSchemaLocation="../../../../../ADCore/XML_schema/NDAtt

> ributes.xsd"

>

>     >

>

>     <Attribute name="DriverFileName"  type="PARAM"

> source="FULL_FILE_NAME"                       datatype="STRING"

> description="Driver file name"/>

>

>     <Attribute name="ROI0Size"      type="PARAM"    source="DIM0_SIZE"

> datatype="INT"     description="X size ROI 0"/>

>

>     <Attribute name="ROI0Mean"      type="PARAM"

> source="MEAN_VALUE"              datatype="DOUBLE"     description="Mean

> value ROI 0"/>

>

>     <Attribute name="ROI1Mean"      type="PARAM"

> source="MEAN_VALUE" addr="1"     datatype="DOUBLE"

> description="Mean value ROI 0"/>

>

>     <Attribute name="_ROI0Total"     type="PARAM"

> source="ROISTAT_TOTAL"                   datatype="DOUBLE"     description="Total

> counts ROI 0"/>

>

>     <Attribute name="_ROI1Total"     type="PARAM"

> source="ROISTAT_TOTAL"      addr="1"     datatype="DOUBLE"

> description="Total counts ROI 1"/>

>

>     <Attribute name="MaxSizeX"            type="PARAM"

> source="MAX_SIZE_X"                   datatype="INT"        description="Detector X

> size"/>

>

>     <Attribute name="MaxSizeY"            type="PARAM"

> source="MAX_SIZE_Y"                   datatype="INT"        description="Detector Y

> size"/>

>

>     <Attribute name="CameraModel"         type="PARAM"    source="MODEL"

> datatype="STRING"     description="Camera model"/>

>

>     <Attribute name="AttributesFileParam"  type="PARAM"

> source="ND_ATTRIBUTES_FILE"            datatype="STRING"

> description="Attributes file param"/>

>

>     <Attribute name="CameraManufacturer"  type="PARAM"

> source="MANUFACTURER"                 datatype="STRING"

> description="Camera manufacturer"/>

>

> </Attributes>

>

>

>