I am trying to run VDCT version 1271, on FedoraCore5, and have noticed some problems:
when running runScript commend (notice .vdctplugins.xml missing file?):
SYNTAX: ./runScript {.dbd, .dbd} .db
Loading VisualDCT v2.5 build 1271...
gnu.xml.dom.ls.DomLSException: VisualDCT.jar!/config/.vdctplugins.xml (No such file or directory)
at gnu.xml.dom.ls.DomLSParser.getInputSource(libgcj.so.7)
at gnu.xml.dom.ls.DomLSParser.doParse(libgcj.so.7)
at gnu.xml.dom.ls.DomLSParser.parse(libgcj.so.7)
at gnu.xml.dom.ls.DomLSParser.parseURI(libgcj.so.7)
at gnu.xml.dom.DomDocumentBuilder.parse(libgcj.so.7)
at com.cosylab.vdct.xml.XMLManager.readResourceDocument(Unknown Source)
at com.cosylab.vdct.plugin.PluginXMLSerializer.importPlugins(Unknown Source)
at com.cosylab.vdct.plugin.PluginManager.load(Unknown Source)
at com.cosylab.vdct.plugin.PluginManager.<init>(Unknown Source)
at com.cosylab.vdct.plugin.PluginManager.getInstance(Unknown Source)
at com.cosylab.vdct.plugin.export.ExportMenu.init(Unknown Source)
at com.cosylab.vdct.VisualDCT.getExportMenuItem(Unknown Source)
at com.cosylab.vdct.VisualDCT.getFileMenu(Unknown Source)
at com.cosylab.vdct.VisualDCT.getVisualDCTJMenuBar(Unknown Source)
at com.cosylab.vdct.VisualDCT.initialize(Unknown Source)
at com.cosylab.vdct.VisualDCT.<init>(Unknown Source)
at com.cosylab.vdct.VisualDCT$8.run(Unknown Source)
at java.awt.event.InvocationEvent.dispatch(libgcj.so.7)
at java.awt.EventQueue.dispatchEvent(libgcj.so.7)
at java.awt.EventDispatchThread.run(libgcj.so.7)
Caused by: java.io.FileNotFoundException: VisualDCT.jar!/config/.vdctplugins.xml (No such file or directory)
at gnu.java.nio.channels.FileChannelImpl.open(libgcj.so.7)
at gnu.java.nio.channels.FileChannelImpl.<init>(libgcj.so.7)
at java.io.FileInputStream.<init>(libgcj.so.7)
at gnu.java.net.protocol.file.Connection.connect(libgcj.so.7)
at gnu.java.net.protocol.file.Connection.getInputStream(libgcj.so.7)
at java.net.URL.openStream(libgcj.so.7)
at gnu.xml.dom.ls.DomLSParser.getInputSource(libgcj.so.7)
...19 more
---------------
If I just run
./runScript
A GUI "Open" opens up, but I can not select any .dbd files (can not browse directories). If "Open" window is moved, after "Files of Type:" is selected, the "Files of Types:" window does not move with "Open" wondow, but stays in old position.
In either case the VDCT does not run.
Kazimierz Gofron ([email protected]) (630)252-0535
Structure Biology Center
Advanced Photon Source, Argonne National Laboratory
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